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Endo-xylanases as tools for production of substituted xylooligosaccharides with prebiotic properties

Xylan has a main chain consisting of β-1,4-linked xylose residues with diverse substituents. Endoxylanases cleave the xylan chain at cleavage sites determined by the substitution pattern and thus give different oligosaccharide product patterns. Most known endoxylanases belong to glycoside hydrolase (GH) families 10 and 11. These enzymes work well on unsubstituted xylan but accept substituents in c

A Simple Method of Genomic DNA Extraction from Human Samples for PCR-RFLP Analysis

Isolation of DNA from blood and buccal swabs in adequate quantities is an integral part of forensic research and analysis. The present study was performed to determine the quality and the quantity of DNA extracted from four commonly available samples and to estimate the time duration of the ensuing PCR amplification. Here, we demonstrate that hair and urine samples can also become an alternate sou

Nanowire-based biosensor for short DNA using fluorescent silver nanoclusters

Sensitive detection of short nucleic acids is used to identify viral and bacterial diseases, detect biomarkers of cancer, as well as in gene expression studies. Currently available techniques such as PCR, electrochemical detection and SPR are typically costly and often require amplification of the DNA. Here, we demonstrate a sensing system for picomolar detection of short single-stranded DNA by fl

Genetic traces of hybrid zone movement across a fragmented habitat

Theoretical and empirical studies suggest that the structure and position of hybrid zones can change over time. Evidence for moving hybrid zones has been directly inferred by repeated sampling over time, or indirectly through the detection of genetic footprints left by the receding species and the resulting asymmetric patterns of introgression across markers. We here investigate a hybrid zone form

Short- and long-term direct and indirect costs of illness after ostomy creation – a Swedish nationwide registry study

Background: Despite advance in care of people with an ostomy, related complications remain prevalent. The objective of this study was to examine short- and long-term healthcare resource utilization and associated costs after ostomy creation. Methods: This observational study was based on retrospectively collected data from national and regional Swedish registries. The population consisted of peopl

Long-range PCR facilitates the identification of PMS2-specific mutations

Mutations within the DNA mismatch repair gene, "postmeiotic segregation increased 2" (PMS2), have been associated with a predisposition to hereditary nonpolyposis colorectal cancer (HNPCC; Lynch syndrome). The presence of a large family of highly homologous PMS2 pseudogenes has made previous attempts to sequence PMS2 very difficult. Here, we describe a novel method that utilizes long-range PCR as

Clinical spectrum of hepatitis C-related liver disease and response to treatment with interferon and ribavirin in haemophilia or von Willebrand disease

Our aim was to evaluate the severity of liver disease resulting from chronic hepatitis C in haemophilia or von Willebrand disease and the efficacy of 6 months treatment with interferon alpha and ribavirin. Fifty-five liver biopsies were performed in 43 patients without any bleeding complications, as seen with ultrasound immediately after the biopsy and 48 h thereafter. Histological changes were mi

Separation of hemicellulosic oligomers from steam-treated spruce wood using gel filtration

Interest in the use of renewable raw materials for the production of various compounds that can replace fossil-based products is steadily increasing. In this study, the extraction and separation of hemicellulosic oligomers from spruce, to be used for the production of polymers such as hydrogels, was investigated. The focus of the study was on gel filtration of the solution from steam treatment of

Impact of harvest year on amino acids and sugars in potatoes and effect on acrylamide formation during frying

Acrylamide is formed via the Maillard reaction between reducing sugars and asparagine in a number of carbohydrate-rich foods during heat treatment. High acrylamide levels have been found in potato products processed at high temperatures. To examine the impact of harvest year, information on weather conditions during growth, that is, temperature, precipitation, and light, was collected, together wi

Influence of initial C/N ratio on chemical and microbial composition during long term composting of straw

Shredded straw of Miscanthus was composted in 800-L boxes with different amounts of pig slurry added as nitrogen source. The impact of the different initial CIN ratios (11, 35, 47, 50, and 54) on the composting process and the end product was evaluated by examining chemical and microbiological parameters during 12 months of composting. Low initial C/N ratios caused a fast degradation of fibers dur

A combined quantum and molecular mechanical study of the O-2 reductive cleavage in the catalytic cycle of multicopper oxidases

The four-electron reduction of dioxygen to water in multicopper oxidases takes place in a trinuclear copper cluster, which is linked to a mononuclear blue copper site, where the substrates are oxidized. Recently, several intermediates in the catalytic cycle have been spectroscopically characterized, and two possible structural models have been suggested for both the peroxy and native intermediates

A toxicologic and dermatologic assessment of cinnamyl phenylpropyl materials when used as fragrance ingredients

The cinnamyl phenylpropyl fragrance ingredients are a diverse group of chemical structures that have similar metabolic and toxicity profiles. A toxicological and dermatological review of these fragrance ingredients is presented. The common characteristic structural element of cinnamyl phenylpropyl materials is an aryl substituted primary alcohol/aldehyde/ester. For high end users, calculated maxim

Characterization of Indigestible Carbohydrates in Various Fractions from Wheat Processing

Fractions rich in indigestible carbohydrates, such as fructan and arabinoxylan, are obtained as by-products when ethanol, starch, and gluten are produced from wheat flour. Today, these fractions are used as animal feed. However, these components may have positive physiological effects in humans. In this study, the content of indigestible carbohydrates in distillers' grains and process streams from

Vertical distribution and pigmentation of Antarctic zooplankton determined by a blend of UV radiation, predation and food availability

Selection pressure induced by simultaneously occurring environmental threats is a major evolutionary driver for organisms in terrestrial, as well as in aquatic ecosystems. For example, protection against ultraviolet radiation (UVR) and predation include both morphological and behavioral components. Here we address those selective pressures on zooplankton by performing a latitudinal monitoring, com

Simultaneous saccharification and fermentation of steam-pretreated willow

Ethanol was produced from SO2-impregnated steam-pretreated willow by simultaneous saccharification and fermentation (SSF). Experiments with SSF were performed in stirred 300-ml vessels and in a 3-1 fermenter. Commercial cellulases were used in combination with either Saccharomyces cerevisiae or Zymomonas mobilis. The amounts of substrate, enzymes, yeast, bacteria, and nutrients were varied. The te

Philopatric predisposition to predation-induced ecological traps: habitat-dependent mortality of breeding eiders

Because population size is sensitive to changes in adult survival, adult survival may be buffered against environmental variability. Philopatry may be adaptive in changing environments, but it could also constrain breeding habitat selection under changing conditions such as shifting predation regimes. Habitat preference and quality could become decoupled in long-lived philopatric species that evol

Climate change mitigation and energy efficiency: challenges in the wastewater sector

The wastewater sector provides water sanitation to populations in order to preserve humanhealth and the natural environment. In developed countries, due among others to increasingpressures coming from climate change and population growth, the wastewater treatment isaffected and needs to adapt to such changes. As a result, effluent requirements arebecoming more stringent, nutrients and organic remo

Lactose crystallization in drum dried, freeze dried and spray dried skim milk powders

Crystallization of amorphous lactose during storage at high relative humidity and high temperatures has been found to impair the quality of skim milk powders. This is related to the glass transition of lactose. Above a certain temperature (glass transition temperature) amorphous lactose transfers through the rubbery zone into a crystalline state due to increased molecular mobility and as a result

Investigating stellar-mass black hole kicks

We investigate whether stellar-mass black holes have to receive natal kicks in order to explain the observed distribution of low-mass X-ray binaries containing black holes within our Galaxy. Such binaries are the product of binary evolution, where the massive primary has exploded forming a stellar-mass black hole, probably after a common envelope phase where the system contracted down to separatio

Effects of recombinant bactericidal/permeability-increasing protein (rBPI23) on neutrophil activity in burned rats

Bactericidal/permeability-increasing protein (BPI) is a neutrophil granule protein with potent bactericidal and lipopolysaccharide (LPS)-neutralizing activities. The purpose of this study was to determine if a human recombinant BPI product, rBPI23, would influence neutrophil (PMN) sequestration into various tissues in a rat burn injury model. Leukosequestration may produce local tissue injury from